Hunting for microsatellite instability in long-read data with Owl

Author(s): Zev Kronenberg¹, Khi Pin Chua¹, Mark J.P. Chaisson^2,7, Byunggil Yoo³, Lisa Lansdon³, William J. Rowell¹, Guilherme de Sena Brandine¹, Egor Dolzhenko¹, Kobe Ikegami⁶, Kie Kyon Huang⁴, Patrick Tan^4,5,10, Shruti Bhise⁶, Everett Fan⁶, Mark Mendoza⁶, Emily O’Donnell³, Tomi Pastinen³, Elizabeth R. Lawlor^6,8,9, Scott N. Furlan^6,9, Midhat S. Farooqi³, Michael A. Eberle¹ 1) PacBio, Menlo Park, CA, USA; 2) University of Southern California, Los Angeles, CA, USA; 3) Children’s Mercy Hospital, University of Missouri–Kansas City School of Medicine, Kansas City, MO, USA; 4) Duke-NUS Medical School, Singapore; 5) Genome Institute of Singapore; 6) Fred Hutch Cancer Center, Seattle, WA, USA; 7) Norris Comprehensive Cancer Center, University of Southern California, Los Angeles, CA, USA; 8) Ben Towne Center for Childhood Cancer and Blood Disorders Research, Seattle Children’s Research Institute, Seattle, WA, USA; 9) Department of Pediatrics, University of Washington, Seattle, WA, USA; 10) Precision Health Research Singapore

Organization:
Year: 2026

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