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测序数据集

获取通过单分子实时（SMRT）测序产生的公开数据集。 

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Whole genome sequencing

Application Dataset Data type PacBio system
Variant detection, assembly, epigenetics Homo sapiens - GIAB sample HG002 with 5mC calls HiFi reads Revio system
Tumor/normal COLO829 melanoma HiFi reads Revio system
Whole genome sequencing Various plant & animals - maize, mouse, and others HiFi reads Revio system
Assembly (ultra-low DNA input) Phlebotomus papatasi, Homo sapiens, Drosophila melanogaster HiFi reads Sequel II system
Assembly Food safety and infectious microbes – 96 plex HiFi reads Sequel II system

Targeted sequencing

Application Dataset Literature Technology Sequencing system
PureTarget Repeat expansion panel Coriell samples PureTarget brochure HiFi long read Sequel IIe System
PureTarget Repeat expansion panel HG001 and HG002 48-plex PureTarget brochure HiFi long read Revio system
PureTarget Repeat expansion panel HG001 and HG002 8-plex PureTarget brochure HiFi long read Sequel IIe System
Target Enrichment Twist Alliance Dark Genes Panel HiFi sequencing with Twist Bioscience target enrichment HiFi long read Revio system
Target Enrichment SeraCare ctDNA w/Agilent capture panel SBB sequencing on SeraCare ctDNA using Agilent hybrid capture panel SBB short read Onso system
Target Enrichment Twist Alliance Dark Gene Panel Twist Alliance Dark Genes panel HiFi long read Sequel IIe System
Target Enrichment Twist Alliance Long Read PGx Panel Twist Alliance Dark Genes panel HiFi long read Sequel IIe System
Target Enrichment Twist Custom BRCA1/2 Panel HiFi sequencing with Twist Bioscience target enrichment HiFi long read Sequel IIe System
Amplicon sequencing CYP2D6 amplicon HiFi amplicon sequencing for pharmacogenetics: CYP2D6 HiFi long read Sequel IIe System

RNA sequencing

Application Dataset Download literature Technology Sequencing system
Kinnex 单细胞 Homo sapiens - PBMC 10x Chromium Single Cell (5' and 3') libraries Kinnex single-cell application note HiFi long-read Sequel II and Revio systems
Kinnex 单细胞 Homo sapiens – HG002 (10x 5') Kinnex single-cell application note HiFi long-read Revio system
Kinnex 全长RNA Homo sapiens – UHRR Kinnex full-length RNA application note HiFi long read Sequel II and Revio systems
Kinnex 全长RNA Homo sapiens – HG002 Kinnex full-length RNA application note HiFi long read Revio system
Kinnex 全长RNA Homo sapiens - Heart Kinnex full-length RNA application note HiFi long read Revio system
Kinnex 全长RNA Homo sapiens - Cerebellum Kinnex full-length RNA application note HiFi long read Revio system

Metagenomics

Application Dataset Data type PacBio system
Kinnex 16S rRNA ZymoBIOMICS Fecal Reference with TruMatrix Technology (human) HiFi long read Sequel II and Revio systems
Kinnex 16S rRNA Mixture: ZymoBIOMICS Gut Microbiome Standard, ZymoBIOMICS Fecal Reference with TruMatrix™ Technology, ATCC 20 Strain Even Mix Genomic Material, ATCC 20 Strain Staggered Mix Genomic Material HiFi long read Sequel II and Revio systems
Metagenomic profiling and assembly ZymoBIOMICS Fecal Reference with TruMatrix Technology (human) HiFi long read Revio system
Metagenomic profiling and assembly ZymoBIOMICS Fecal Reference with TruMatrix Technology (human) HiFi long read Sequel II system
Metagenomic profiling and assembly HiFi long read Sequel II system
Metagenomic profiling and assembly HiFi long read Sequel II system
Full-length 16S sequencing HiFi long read Sequel II system

Gene therapy vectors

Application Dataset Data type PacBio system
AAV scAAV 8-plex – Vector Biolabs rh10-CBA-eGFP HiFi reads Sequel II system
AAV ssAAV – ViGene pAV-CMF-GFP HiFi reads Sequel II system
AAV ssAAV-scAAV 1:10 mixture HiFi reads Sequel II system

COVID-19 sequencing

Application Dataset Data type PacBio system
SARS-CoV-2 surveillance Omicron samples HiFi reads Sequel II system
SARS-CoV-2 surveillance Synthetic RNA controls HiFi reads Sequel II system
SARS-CoV-2 surveillance Surveillance samples HiFi reads Sequel II system

File formats

Dataset Data type PacBio system
8 SMRT Cell run directory Directory Revio system
HiFi reads Sequel IIe system
HiFi reads Sequel IIe system

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